Seminar: Aktuelle Themen der Bioinformatik

Dirk Metzler, Sommersemester 2007
S; 2 SWS; Schein; Zuordnung: ThBI, PTBI;
Mi, 14:00 - 16:00, RM 11-15 / 9;
Do, 10:00 - 12:00, RM 11-15 / 9;

 

PDF: Hinweise zum Seminar

  A sufficient condition for reducing recursions in hidden markov models    
6.06.2007  Tämur Ali Khan   Ausarbeitung
  Y.S. Song. A sufficient condition for reducing recursions in hidden Markov models. Bull Math Biol, 68(2):361-84, 2006.    
  Bayesian Segmental Models with Multiple Sequence Alignment Profiles for Protein Secondary Structure and Contact Map Prediction    
20.06.2007  Maxim Knoll Vortrag Ausarbeitung
  W. Chu, Z. Ghahramani, A. Podtelezhnikov, and D.L. Wild. Bayesian segmental models with multiple sequence alignment profiles for protein secondary structure and contact map prediction. IEEE/ACM Trans Comput Biol Bioinform, 3(2):98-113, 2006.    
  Gibbs sampler for statistical multiple alignment    
21.06.2007  Marten Rosselli Vortrag Ausarbeitung
  J.L. Jensen and J. Hein. Gibbs sampler for statistical multiple alignment. Statistica Sinica, 15(4):889-908, 2004.    
  A probabilistic model for gene content evolution with duplication, loss, and horizontal transfer    
27.06.2007  Lyse P. Gatcheussi Vortrag Ausarbeitung
  M. Csürös and I. Miklós. A Probabilistic Model for Gene Content Evolution with Duplication, Loss, and Horizontal Transfer. In Research in Computational Molecular Biology, 10th Annual International Conference, RECOMB 2006, Venice, Italy, April 2-5, 2006. Proceedings, volume 3909 of Lecture Notes in Computer Science, pages 206-220, 2006.    
  Relaxed Phylogenetics and Dating with confidence    
28.06.2007  Prisca Monye Vortrag Ausarbeitung
  A.J. Drummond, S.Y. Ho, M.J. Phillips, and A. Rambaut. Relaxed phylogenetics and dating with confidence. PLoS Biol, 4(5):e88, 2006.    
  Efficient Detection Of Network Motifs    
4.07.2007  Alexander Grimme Vortrag Ausarbeitung
  S. Wernicke. Efficient detection of network motifs. IEEE/ACM Trans Comput Biol Bioinform, 3(4):347-59, 2006.    
  Bayesian logistic regression using a perfect phylogeny    
11.07.2007  John Philipp de Graaff Vortrag Ausarbeitung
  T.G. Clark, M. De Iorio, and R.C. Griffiths. Bayesian logistic regression using a perfect phylogeny. Biostatistics, 8(1):32-52, 2007.    
  Efficient Methods for Estimating Amino Acid Replacement Rates    
12.07.2007  Tobias Gontermann Vortrag Ausarbeitung
  L. Arvestad. Efficient methods for estimating amino acid replacement rates. J Mol Evol, 62(6):663-73, 2006    
  Three-dimensional shape-structure comparison method for protein classification.    
18.07.2007  Tim Föller Vortrag Ausarbeitung
  P. Daras, D. Zarpalas, A. Axenopoulos, D. Tzovaras, and M.G. Strintzis. Three-dimensional shape-structure comparison method for protein classification. IEEE/ACM Trans Comput Biol Bioinform, 3(3):193-207, 2006.    
  Maximal Accurate Forests from Distance Matrices.    
18.07.2007  Roozbeh Hassanvand Vortrag Ausarbeitung
  C. Daskalakis, C. Hill, A. Jaffe, R. Mihaescu, E. Mossel, and S. Rao. Maximal Accurate Forests from Distance Matrices. In Research in Computational Molecular Biology, 10th Annual International Conference, RECOMB 2006, Venice, Italy, April 2-5, 2006. Proceedings, volume 3909 of Lecture Notes in Computer Science, pages 281-295, 2006.    
  Motif Search in Graphs: Application to Metabolic Networks    
19.07.2007  Sinan Öz Vortrag Ausarbeitung
  V. Lacroix, C.G. Fernandes, and M.F. Sagot. Motif search in graphs: application to metabolic networks. IEEE/ACM Trans Comput Biol Bioinform, 3(4):360-8, 2006.    




Lin Himmelmann ,IMPRESSUM
Last modified: Wed Sep 27 17:20:48 CEST 2006